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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848848.1_cds_XP_016510569.1_23392
CDS Infomation

[gene=LOC107827866] [db_xref=GeneID:107827866] [protein=probable sodium/metabolite cotransporter BASS3, chloroplastic] [frame=2] [partial=5'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016510569.1] [location=complement(join(75987..76230,77046..77293,77442..77748,77840..77935,78659..>78961))] [gbkey=CDS]
Sequence

AATTTCTCAATTTTGCATAGCAAGAACCGATATTTAAGCTCTCAAGCTATTAAAAACGTA
AAAGGTCTTAATGGGGGCTCGTTAAACGCAGTTGCATGTTCGACTTCGTCGCCGTTAATT
GGGAGAGTGGGTTTGCATAGACGGGAAGGTAACTTTTCGTTACTGTCGTTTGGTGCAAAT
CCAAGGAGTTTTTATGTCGAAGATGAAAAGGCGGATTATTCACAAGCTTTGTCTGCATTA
CTTCCATTTGTTGTGGCGCTCACTGCTGTTGCTGCTCTTTCTCAACCTTCCACTTTCACT
TGGGTGTCTAAAGAAATGTACGCTCCTGCGCTTGGAGGAATCATGTTGTCAATTGGCATT
AGACTTTCCATTGATGATTTTGCTCTCGCTATTAAAAGACCTTTGCCCTTATCTGTTGGA
TTCATTGCTCAGTATGTCCTGAAGCCAGCTCTTGGCATACTTGTAGCACAGGCATTTGGG
ATGCCTCAGGCGTTCTATGCTGGTTTTGTCCTGATGTCTTGTGTTGCTGGGGCTCAATTA
TCAAGTTACGCCAGCTTCTTGAGCAAAAGTGACGTGGCGTTCAGTATTCTCTTGACCAGT
TCAAGCACCATTGCTTCAGTTCTTGTTACTCCACTTCTAACTGGCCTTCTCATTGGTTCA
GTTGTTCCAGTTGATGCAGTTGCAATGTCAAAGTCAATCTTGCAGGTCGTTCTTCTCCCA
GTCACTCTTGGCTTAGCGCTGAACACCTATGCAAAACCAGTAGTATCTGTTATACAACCC
GTGATGCCTTTCGTTGCCATGATTTGTACTTCACTGTGTATTGGCAGTCCTCTTGCAATC
AACCGTGCTCAGATTCTTTCTGCTGAGGGTGCCAGGTTGATTGGTCCTGTACTGACATTT
CATGCAGTGGCATTTGCAGTGGGTTATTGGCTCTCGAAACTTCCATTTTTTAGGTTTGAA
GAAGAAGTCTGCAGGACGATTTCAGTATGCACAGGAATGCAGAGTTCCACGCTGGCAGGG
CTTCTTGCAACCCAATTCCTCGGGAGCACTCAAGCGGTCCCTCCTGCATGTTCCGTAGTT
GCAATGGCTATCATGGGCCTTTGTCTTGCCTCTTTCTGGGGAGGTGGATATCGGATCAGG
GACATACCGTCCGTGCTCTTTCTACAAACTGCTTCGACAATCAAGCCTTCTCAGTAA

Peptide Sequence

PEP ID

XP_016510569.1
PEP Infomation

PREDICTED: probable sodium/metabolite cotransporter BASS3, chloroplastic [Nicotiana tabacum]
Sequence

MSLIPSLSLKYPKPYLLSPNSISSSNSNFSILHSKNRYLSSQAIKNVKGLNGGSLNAVAC
STSSPLIGRVGLHRREGNFSLLSFGANPRSFYVEDEKADYSQALSALLPFVVALTAVAAL
SQPSTFTWVSKEMYAPALGGIMLSIGIRLSIDDFALAIKRPLPLSVGFIAQYVLKPALGI
LVAQAFGMPQAFYAGFVLMSCVAGAQLSSYASFLSKSDVAFSILLTSSSTIASVLVTPLL
TGLLIGSVVPVDAVAMSKSILQVVLLPVTLGLALNTYAKPVVSVIQPVMPFVAMICTSLC
IGSPLAINRAQILSAEGARLIGPVLTFHAVAFAVGYWLSKLPFFRFEEEVCRTISVCTGM
QSSTLAGLLATQFLGSTQAVPPACSVVAMAIMGLCLASFWGGGYRIRDIPSVLFLQTAST
IKPSQ

Transcript Sequence

Gene sequence data has not been registered.